Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYN1P17600 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.65■□□□□ 0.58
SYN1P17600 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.65■□□□□ 0.58
SYN1P17600 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.65■□□□□ 0.58
SYN1P17600 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
SYN1P17600 KRT17P8-201ENST00000540749 863 ntBASIC18.65■□□□□ 0.58
SYN1P17600 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
SYN1P17600 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.65■□□□□ 0.58
SYN1P17600 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.65■□□□□ 0.58
SYN1P17600 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.65■□□□□ 0.58
SYN1P17600 AC008738.7-201ENST00000609744 511 ntBASIC18.65■□□□□ 0.58
SYN1P17600 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SYN1P17600 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SYN1P17600 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYN1P17600 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYN1P17600 WASH6P-202ENST00000359512 1437 ntBASIC18.65■□□□□ 0.58
SYN1P17600 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYN1P17600 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYN1P17600 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYN1P17600 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.65■□□□□ 0.58
SYN1P17600 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.65■□□□□ 0.58
SYN1P17600 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYN1P17600 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYN1P17600 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYN1P17600 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 MIR346-201ENST00000362234 95 ntBASIC18.64■□□□□ 0.57
SYN1P17600 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 AL512384.1-201ENST00000406683 331 ntBASIC18.64■□□□□ 0.57
SYN1P17600 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.64■□□□□ 0.57
SYN1P17600 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.64■□□□□ 0.57
SYN1P17600 RAB43P1-201ENST00000561790 589 ntBASIC18.64■□□□□ 0.57
SYN1P17600 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.64■□□□□ 0.57
SYN1P17600 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.64■□□□□ 0.57
SYN1P17600 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SYN1P17600 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.64■□□□□ 0.57
SYN1P17600 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYN1P17600 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.64■□□□□ 0.57
SYN1P17600 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SYN1P17600 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYN1P17600 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.63■□□□□ 0.57
SYN1P17600 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.63■□□□□ 0.57
SYN1P17600 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SYN1P17600 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.63■□□□□ 0.57
SYN1P17600 AL353779.1-201ENST00000434793 351 ntBASIC18.63■□□□□ 0.57
SYN1P17600 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.63■□□□□ 0.57
SYN1P17600 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SYN1P17600 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.63■□□□□ 0.57
SYN1P17600 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.63■□□□□ 0.57
SYN1P17600 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 AC092552.1-201ENST00000547243 906 ntBASIC18.63■□□□□ 0.57
SYN1P17600 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.63■□□□□ 0.57
SYN1P17600 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYN1P17600 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 AC012569.1-201ENST00000591191 1524 ntBASIC18.63■□□□□ 0.57
SYN1P17600 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYN1P17600 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.63■□□□□ 0.57
SYN1P17600 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
SYN1P17600 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SYN1P17600 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
SYN1P17600 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYN1P17600 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYN1P17600 AP006294.1-201ENST00000415407 339 ntBASIC18.62■□□□□ 0.57
SYN1P17600 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.62■□□□□ 0.57
SYN1P17600 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.62■□□□□ 0.57
SYN1P17600 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.62■□□□□ 0.57
SYN1P17600 MIR4525-201ENST00000580000 75 ntBASIC18.62■□□□□ 0.57
SYN1P17600 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYN1P17600 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYN1P17600 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.62■□□□□ 0.57
SYN1P17600 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYN1P17600 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYN1P17600 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.62■□□□□ 0.57
SYN1P17600 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.62■□□□□ 0.57
SYN1P17600 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYN1P17600 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms