Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BRAFP15056 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BRAFP15056 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BRAFP15056 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAFP15056 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.83■□□□□ 0.44
BRAFP15056 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.82■□□□□ 0.44
BRAFP15056 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.82■□□□□ 0.44
BRAFP15056 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 LINC00167-201ENST00000530583 1419 ntBASIC17.82■□□□□ 0.44
BRAFP15056 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.82■□□□□ 0.44
BRAFP15056 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.82■□□□□ 0.44
BRAFP15056 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.82■□□□□ 0.44
BRAFP15056 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.82■□□□□ 0.44
BRAFP15056 MIR3180-1-201ENST00000580374 94 ntBASIC17.82■□□□□ 0.44
BRAFP15056 MIR3180-3-201ENST00000584616 94 ntBASIC17.82■□□□□ 0.44
BRAFP15056 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.82■□□□□ 0.44
BRAFP15056 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.82■□□□□ 0.44
BRAFP15056 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BRAFP15056 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
BRAFP15056 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
BRAFP15056 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAFP15056 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAFP15056 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 AC016396.2-201ENST00000562575 1417 ntBASIC17.81■□□□□ 0.44
BRAFP15056 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
BRAFP15056 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
BRAFP15056 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.81■□□□□ 0.44
BRAFP15056 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.81■□□□□ 0.44
BRAFP15056 AC092119.3-201ENST00000612618 583 ntBASIC17.81■□□□□ 0.44
BRAFP15056 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.81■□□□□ 0.44
BRAFP15056 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BRAFP15056 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
BRAFP15056 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
BRAFP15056 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAFP15056 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAFP15056 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAFP15056 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BRAFP15056 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAFP15056 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
BRAFP15056 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAFP15056 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms