Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCNAP12004 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.9■□□□□ 0.3
PCNAP12004 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 AP002383.4-201ENST00000442518 975 ntBASIC16.9■□□□□ 0.3
PCNAP12004 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.9■□□□□ 0.3
PCNAP12004 MINOS1P3-201ENST00000457048 203 ntBASIC16.9■□□□□ 0.3
PCNAP12004 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.9■□□□□ 0.3
PCNAP12004 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.9■□□□□ 0.3
PCNAP12004 IGHV3-52-201ENST00000519770 353 ntBASIC16.9■□□□□ 0.3
PCNAP12004 TPSP2-201ENST00000561760 610 ntBASIC16.9■□□□□ 0.3
PCNAP12004 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 AP005901.3-202ENST00000581653 237 ntBASIC16.9■□□□□ 0.3
PCNAP12004 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.9■□□□□ 0.3
PCNAP12004 Z69720.1-201ENST00000601483 472 ntBASIC16.9■□□□□ 0.3
PCNAP12004 AC091076.1-201ENST00000610741 619 ntBASIC16.9■□□□□ 0.3
PCNAP12004 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.9■□□□□ 0.3
PCNAP12004 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.9■□□□□ 0.3
PCNAP12004 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCNAP12004 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.9■□□□□ 0.3
PCNAP12004 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCNAP12004 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.9■□□□□ 0.3
PCNAP12004 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.9■□□□□ 0.3
PCNAP12004 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.9■□□□□ 0.3
PCNAP12004 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.9■□□□□ 0.3
PCNAP12004 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.9■□□□□ 0.3
PCNAP12004 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCNAP12004 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCNAP12004 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCNAP12004 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCNAP12004 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.89■□□□□ 0.3
PCNAP12004 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PCNAP12004 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCNAP12004 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.89■□□□□ 0.29
PCNAP12004 FAM220CP-201ENST00000395253 831 ntBASIC16.89■□□□□ 0.29
PCNAP12004 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
PCNAP12004 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 AC002558.1-201ENST00000488906 803 ntBASIC16.89■□□□□ 0.29
PCNAP12004 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.89■□□□□ 0.29
PCNAP12004 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.89■□□□□ 0.29
PCNAP12004 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.89■□□□□ 0.29
PCNAP12004 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCNAP12004 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCNAP12004 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.89■□□□□ 0.29
PCNAP12004 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCNAP12004 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.89■□□□□ 0.29
PCNAP12004 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCNAP12004 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCNAP12004 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCNAP12004 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCNAP12004 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.88■□□□□ 0.29
PCNAP12004 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCNAP12004 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.88■□□□□ 0.29
PCNAP12004 DRAXINP1-201ENST00000437611 948 ntBASIC16.88■□□□□ 0.29
PCNAP12004 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.88■□□□□ 0.29
PCNAP12004 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.88■□□□□ 0.29
PCNAP12004 AC009533.2-201ENST00000543664 586 ntBASIC16.88■□□□□ 0.29
PCNAP12004 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.88■□□□□ 0.29
PCNAP12004 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PCNAP12004 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.88■□□□□ 0.29
PCNAP12004 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCNAP12004 AL139327.4-201ENST00000612362 153 ntBASIC16.88■□□□□ 0.29
PCNAP12004 AC093458.2-201ENST00000623150 629 ntBASIC16.88■□□□□ 0.29
PCNAP12004 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms