Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TPM1P09493 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 SNORA78-201ENST00000459373 127 ntBASIC19.11■□□□□ 0.65
TPM1P09493 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.11■□□□□ 0.65
TPM1P09493 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.11■□□□□ 0.65
TPM1P09493 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.11■□□□□ 0.65
TPM1P09493 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.11■□□□□ 0.65
TPM1P09493 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 AL136038.4-201ENST00000603606 1261 ntBASIC19.11■□□□□ 0.65
TPM1P09493 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 AC005915.1-201ENST00000624912 2018 ntBASIC19.11■□□□□ 0.65
TPM1P09493 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TPM1P09493 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPM1P09493 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TPM1P09493 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TPM1P09493 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.1■□□□□ 0.65
TPM1P09493 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TPM1P09493 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TPM1P09493 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.1■□□□□ 0.65
TPM1P09493 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM1P09493 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.1■□□□□ 0.65
TPM1P09493 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.1■□□□□ 0.65
TPM1P09493 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM1P09493 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.1■□□□□ 0.65
TPM1P09493 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TPM1P09493 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.1■□□□□ 0.65
TPM1P09493 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM1P09493 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM1P09493 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM1P09493 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
TPM1P09493 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 AL391807.1-203ENST00000604392 2365 ntBASIC19.09■□□□□ 0.65
TPM1P09493 MMP23A-201ENST00000234610 1017 ntBASIC19.09■□□□□ 0.65
TPM1P09493 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 AC002558.1-201ENST00000488906 803 ntBASIC19.09■□□□□ 0.65
TPM1P09493 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM1P09493 GCSHP2-201ENST00000560971 527 ntBASIC19.09■□□□□ 0.65
TPM1P09493 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.09■□□□□ 0.65
TPM1P09493 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.09■□□□□ 0.65
TPM1P09493 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.09■□□□□ 0.65
TPM1P09493 PCDHA1-201ENST00000378133 2726 ntBASIC19.09■□□□□ 0.65
TPM1P09493 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.09■□□□□ 0.65
TPM1P09493 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
TPM1P09493 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.09■□□□□ 0.65
TPM1P09493 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 FLJ38576-201ENST00000623820 2459 ntBASIC19.09■□□□□ 0.65
TPM1P09493 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TPM1P09493 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TPM1P09493 AL513477.1-201ENST00000602865 2407 ntBASIC19.09■□□□□ 0.65
TPM1P09493 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TPM1P09493 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TPM1P09493 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TPM1P09493 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms