Protein–RNA interactions for Protein: P05106

ITGB3, Integrin beta-3, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3P05106 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITGB3P05106 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ITGB3P05106 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ITGB3P05106 AC104109.2-201ENST00000602919 1418 ntBASIC18.56■□□□□ 0.56
ITGB3P05106 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ITGB3P05106 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.56■□□□□ 0.56
ITGB3P05106 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITGB3P05106 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ITGB3P05106 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.56■□□□□ 0.56
ITGB3P05106 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ITGB3P05106 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.55■□□□□ 0.56
ITGB3P05106 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
ITGB3P05106 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.55■□□□□ 0.56
ITGB3P05106 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.55■□□□□ 0.56
ITGB3P05106 SLC25A1P3-201ENST00000395415 828 ntBASIC18.55■□□□□ 0.56
ITGB3P05106 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.55■□□□□ 0.56
ITGB3P05106 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 AL805961.1-202ENST00000641562 540 ntBASIC18.55■□□□□ 0.56
ITGB3P05106 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ITGB3P05106 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 AC139713.2-201ENST00000641328 2723 ntBASIC18.55■□□□□ 0.56
ITGB3P05106 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ITGB3P05106 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.55■□□□□ 0.56
ITGB3P05106 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ITGB3P05106 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.54■□□□□ 0.56
ITGB3P05106 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 AC093525.9-201ENST00000624961 1746 ntBASIC18.54■□□□□ 0.56
ITGB3P05106 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ITGB3P05106 AC116353.5-201ENST00000638148 1699 ntBASIC18.54■□□□□ 0.56
ITGB3P05106 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ITGB3P05106 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ITGB3P05106 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ITGB3P05106 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.54■□□□□ 0.56
ITGB3P05106 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.54■□□□□ 0.56
ITGB3P05106 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.54■□□□□ 0.56
ITGB3P05106 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.54■□□□□ 0.56
ITGB3P05106 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.54■□□□□ 0.56
ITGB3P05106 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
ITGB3P05106 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.54■□□□□ 0.56
ITGB3P05106 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ITGB3P05106 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.53■□□□□ 0.56
ITGB3P05106 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.53■□□□□ 0.56
ITGB3P05106 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.53■□□□□ 0.56
ITGB3P05106 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.53■□□□□ 0.56
ITGB3P05106 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ITGB3P05106 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ITGB3P05106 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.53■□□□□ 0.56
ITGB3P05106 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ITGB3P05106 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 AC145285.3-201ENST00000564603 959 ntBASIC18.53■□□□□ 0.56
ITGB3P05106 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.53■□□□□ 0.56
ITGB3P05106 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.53■□□□□ 0.56
ITGB3P05106 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.53■□□□□ 0.56
ITGB3P05106 Z83851.2-201ENST00000609564 659 ntBASIC18.53■□□□□ 0.56
ITGB3P05106 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.53■□□□□ 0.56
ITGB3P05106 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
ITGB3P05106 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITGB3P05106 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms