Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.8■□□□□ 0.12
P04436 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
P04436 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
P04436 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.8■□□□□ 0.12
P04436 AP002414.1-201ENST00000391405 1147 ntBASIC15.8■□□□□ 0.12
P04436 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.8■□□□□ 0.12
P04436 PTCHD3P3-201ENST00000403073 906 ntBASIC15.8■□□□□ 0.12
P04436 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.8■□□□□ 0.12
P04436 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.8■□□□□ 0.12
P04436 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
P04436 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.8■□□□□ 0.12
P04436 RNA5SP416-201ENST00000516838 111 ntBASIC15.8■□□□□ 0.12
P04436 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.8■□□□□ 0.12
P04436 MIR4751-201ENST00000578027 74 ntBASIC15.8■□□□□ 0.12
P04436 AL671883.3-201ENST00000603274 991 ntBASIC15.8■□□□□ 0.12
P04436 AC140113.2-201ENST00000604370 208 ntBASIC15.8■□□□□ 0.12
P04436 AC008667.4-201ENST00000607370 168 ntBASIC15.8■□□□□ 0.12
P04436 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
P04436 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.8■□□□□ 0.12
P04436 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
P04436 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
P04436 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
P04436 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.8■□□□□ 0.12
P04436 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04436 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 AC018470.1-201ENST00000624790 3129 ntBASIC15.79■□□□□ 0.12
P04436 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
P04436 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.79■□□□□ 0.12
P04436 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
P04436 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
P04436 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.79■□□□□ 0.12
P04436 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.79■□□□□ 0.12
P04436 CRYGEP-201ENST00000412192 528 ntBASIC15.79■□□□□ 0.12
P04436 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.79■□□□□ 0.12
P04436 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.79■□□□□ 0.12
P04436 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.79■□□□□ 0.12
P04436 IGHV3-65-201ENST00000523210 341 ntBASIC15.79■□□□□ 0.12
P04436 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.79■□□□□ 0.12
P04436 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
P04436 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
P04436 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
P04436 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
P04436 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.79■□□□□ 0.12
P04436 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.79■□□□□ 0.12
P04436 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04436 AC007613.1-201ENST00000572811 2597 ntBASIC15.79■□□□□ 0.12
P04436 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
P04436 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
P04436 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.78■□□□□ 0.12
P04436 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.78■□□□□ 0.12
P04436 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.78■□□□□ 0.12
P04436 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.78■□□□□ 0.12
P04436 PI4KAP1-204ENST00000612579 1703 ntBASIC15.78■□□□□ 0.12
P04436 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.78■□□□□ 0.12
P04436 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
P04436 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
P04436 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.78■□□□□ 0.12
P04436 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms