Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
APOBP04114 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
APOBP04114 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOBP04114 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC10.63□□□□□ -0.71
APOBP04114 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 HNRNPA3P1-201ENST00000401429 1139 ntBASIC10.63□□□□□ -0.71
APOBP04114 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.63□□□□□ -0.71
APOBP04114 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 AC027307.2-201ENST00000591252 911 ntBASIC10.63□□□□□ -0.71
APOBP04114 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
APOBP04114 AC008267.7-201ENST00000624570 1194 ntBASIC10.63□□□□□ -0.71
APOBP04114 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC10.63□□□□□ -0.71
APOBP04114 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC10.63□□□□□ -0.71
APOBP04114 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 AL133338.1-201ENST00000565695 1517 ntBASIC10.63□□□□□ -0.71
APOBP04114 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.63□□□□□ -0.71
APOBP04114 ZNF890P-202ENST00000530367 1156 ntBASIC10.63□□□□□ -0.71
APOBP04114 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC10.63□□□□□ -0.71
APOBP04114 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.63□□□□□ -0.71
APOBP04114 MXI1-205ENST00000393134 889 ntTSL 2 BASIC10.63□□□□□ -0.71
APOBP04114 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 AL353732.1-201ENST00000569618 1459 ntBASIC10.63□□□□□ -0.71
APOBP04114 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
APOBP04114 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
APOBP04114 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
APOBP04114 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 HIST1H2BPS3-201ENST00000419683 341 ntBASIC10.62□□□□□ -0.71
APOBP04114 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 MFF-223ENST00000524634 647 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC10.62□□□□□ -0.71
APOBP04114 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 PODN-203ENST00000395871 2744 ntTSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.62□□□□□ -0.71
APOBP04114 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.62□□□□□ -0.71
APOBP04114 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
APOBP04114 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.62□□□□□ -0.71
APOBP04114 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 AL513480.1-201ENST00000451731 511 ntBASIC10.62□□□□□ -0.71
APOBP04114 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 RN7SL752P-201ENST00000463779 287 ntBASIC10.62□□□□□ -0.71
APOBP04114 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC10.62□□□□□ -0.71
APOBP04114 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC10.62□□□□□ -0.71
APOBP04114 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
APOBP04114 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
APOBP04114 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms