Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 AC010336.2-201ENST00000564226 506 ntBASIC19.54■□□□□ 0.72
ALDH1A1P00352 AL132655.2-201ENST00000596276 594 ntBASIC19.54■□□□□ 0.72
ALDH1A1P00352 AC003101.2-201ENST00000612557 442 ntBASIC19.54■□□□□ 0.72
ALDH1A1P00352 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ALDH1A1P00352 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.54■□□□□ 0.72
ALDH1A1P00352 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALDH1A1P00352 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALDH1A1P00352 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 AC009477.1-201ENST00000452936 217 ntBASIC19.53■□□□□ 0.72
ALDH1A1P00352 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ALDH1A1P00352 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALDH1A1P00352 RARRES2P9-201ENST00000565168 469 ntBASIC19.53■□□□□ 0.72
ALDH1A1P00352 MIR6805-201ENST00000615055 62 ntBASIC19.53■□□□□ 0.72
ALDH1A1P00352 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALDH1A1P00352 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALDH1A1P00352 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ALDH1A1P00352 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.53■□□□□ 0.72
ALDH1A1P00352 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 API5-211ENST00000534695 560 ntTSL 5 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 AL031055.1-201ENST00000606362 631 ntBASIC19.52■□□□□ 0.72
ALDH1A1P00352 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
ALDH1A1P00352 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ALDH1A1P00352 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ALDH1A1P00352 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
ALDH1A1P00352 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ALDH1A1P00352 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ALDH1A1P00352 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 RNU1-129P-201ENST00000384064 167 ntBASIC19.51■□□□□ 0.71
ALDH1A1P00352 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.51■□□□□ 0.71
ALDH1A1P00352 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 AC106886.1-201ENST00000568660 600 ntBASIC19.51■□□□□ 0.71
ALDH1A1P00352 U1.21-201ENST00000580816 167 ntBASIC19.51■□□□□ 0.71
ALDH1A1P00352 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 AL139327.4-201ENST00000612362 153 ntBASIC19.51■□□□□ 0.71
ALDH1A1P00352 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.51■□□□□ 0.71
ALDH1A1P00352 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms