Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.76■□□□□ 0.43
TOP3BO95985 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP3BO95985 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.76■□□□□ 0.43
TOP3BO95985 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TOP3BO95985 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
TOP3BO95985 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP3BO95985 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TOP3BO95985 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.75■□□□□ 0.43
TOP3BO95985 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP3BO95985 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.75■□□□□ 0.43
TOP3BO95985 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.75■□□□□ 0.43
TOP3BO95985 AC145285.3-201ENST00000564603 959 ntBASIC17.75■□□□□ 0.43
TOP3BO95985 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TOP3BO95985 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP3BO95985 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP3BO95985 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TOP3BO95985 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TOP3BO95985 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP3BO95985 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP3BO95985 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP3BO95985 AC096582.2-201ENST00000510860 516 ntBASIC17.74■□□□□ 0.43
TOP3BO95985 IGHV3-22-201ENST00000520721 359 ntBASIC17.74■□□□□ 0.43
TOP3BO95985 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP3BO95985 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP3BO95985 AC011840.4-201ENST00000578471 627 ntBASIC17.74■□□□□ 0.43
TOP3BO95985 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.74■□□□□ 0.43
TOP3BO95985 FAM197Y3-203ENST00000618346 717 ntBASIC17.74■□□□□ 0.43
TOP3BO95985 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP3BO95985 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
TOP3BO95985 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.74■□□□□ 0.43
TOP3BO95985 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TOP3BO95985 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
TOP3BO95985 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.73■□□□□ 0.43
TOP3BO95985 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 UBALD1-205ENST00000590891 2641 ntBASIC17.73■□□□□ 0.43
TOP3BO95985 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TOP3BO95985 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TOP3BO95985 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TOP3BO95985 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 DNAJB3-202ENST00000449667 1266 ntBASIC17.73■□□□□ 0.43
TOP3BO95985 FGFR3P6-201ENST00000457012 610 ntBASIC17.73■□□□□ 0.43
TOP3BO95985 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TOP3BO95985 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 AC034105.1-201ENST00000563488 319 ntBASIC17.73■□□□□ 0.43
TOP3BO95985 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
TOP3BO95985 MIR3687-2-201ENST00000577708 61 ntBASIC17.73■□□□□ 0.43
TOP3BO95985 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.73■□□□□ 0.43
TOP3BO95985 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.73■□□□□ 0.43
TOP3BO95985 MIR3687-1-201ENST00000614492 61 ntBASIC17.73■□□□□ 0.43
TOP3BO95985 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.73■□□□□ 0.43
TOP3BO95985 AC079781.4-201ENST00000641908 219 ntBASIC17.73■□□□□ 0.43
TOP3BO95985 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TOP3BO95985 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.73■□□□□ 0.43
TOP3BO95985 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms