Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KDM4BO94953 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.27■□□□□ 0.03
KDM4BO94953 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KDM4BO94953 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KDM4BO94953 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.26■□□□□ 0.03
KDM4BO94953 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.26■□□□□ 0.03
KDM4BO94953 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.26■□□□□ 0.03
KDM4BO94953 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
KDM4BO94953 AC066615.1-201ENST00000640911 628 ntBASIC15.26■□□□□ 0.03
KDM4BO94953 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
KDM4BO94953 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.26■□□□□ 0.03
KDM4BO94953 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KDM4BO94953 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.26■□□□□ 0.03
KDM4BO94953 KRT89P-201ENST00000620027 1478 ntBASIC15.26■□□□□ 0.03
KDM4BO94953 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
KDM4BO94953 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KDM4BO94953 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KDM4BO94953 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
KDM4BO94953 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
KDM4BO94953 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KDM4BO94953 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KDM4BO94953 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.25■□□□□ 0.03
KDM4BO94953 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.25■□□□□ 0.03
KDM4BO94953 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.25■□□□□ 0.03
KDM4BO94953 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.25■□□□□ 0.03
KDM4BO94953 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KDM4BO94953 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KDM4BO94953 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
KDM4BO94953 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KDM4BO94953 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.25■□□□□ 0.03
KDM4BO94953 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM4BO94953 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM4BO94953 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
KDM4BO94953 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM4BO94953 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM4BO94953 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
KDM4BO94953 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM4BO94953 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KDM4BO94953 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KDM4BO94953 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KDM4BO94953 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
KDM4BO94953 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms