Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST1O76090 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.11■□□□□ 0.49
BEST1O76090 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BEST1O76090 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
BEST1O76090 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST1O76090 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.11■□□□□ 0.49
BEST1O76090 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST1O76090 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
BEST1O76090 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
BEST1O76090 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
BEST1O76090 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.11■□□□□ 0.49
BEST1O76090 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.11■□□□□ 0.49
BEST1O76090 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
BEST1O76090 AC108860.2-201ENST00000562760 2183 ntBASIC18.11■□□□□ 0.49
BEST1O76090 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST1O76090 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST1O76090 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.1■□□□□ 0.49
BEST1O76090 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.1■□□□□ 0.49
BEST1O76090 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 EGFEM1P-202ENST00000431685 1563 ntBASIC18.1■□□□□ 0.49
BEST1O76090 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.1■□□□□ 0.49
BEST1O76090 KRT18P2-201ENST00000447938 1258 ntBASIC18.1■□□□□ 0.49
BEST1O76090 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.1■□□□□ 0.49
BEST1O76090 KRT18P58-201ENST00000527480 1120 ntBASIC18.1■□□□□ 0.49
BEST1O76090 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
BEST1O76090 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BEST1O76090 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BEST1O76090 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
BEST1O76090 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST1O76090 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.1■□□□□ 0.49
BEST1O76090 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BEST1O76090 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.09■□□□□ 0.49
BEST1O76090 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BEST1O76090 PMS2P1-201ENST00000431037 1228 ntBASIC18.09■□□□□ 0.49
BEST1O76090 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.09■□□□□ 0.49
BEST1O76090 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.09■□□□□ 0.49
BEST1O76090 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BEST1O76090 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
BEST1O76090 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST1O76090 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BEST1O76090 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BEST1O76090 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
BEST1O76090 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.08■□□□□ 0.49
BEST1O76090 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST1O76090 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.08■□□□□ 0.49
BEST1O76090 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
BEST1O76090 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
BEST1O76090 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST1O76090 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.08■□□□□ 0.49
BEST1O76090 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST1O76090 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
BEST1O76090 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST1O76090 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
BEST1O76090 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.08■□□□□ 0.48
BEST1O76090 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST1O76090 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
BEST1O76090 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.08■□□□□ 0.48
BEST1O76090 SLC25A6P2-201ENST00000497974 877 ntBASIC18.08■□□□□ 0.48
BEST1O76090 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.08■□□□□ 0.48
BEST1O76090 MIR4751-201ENST00000578027 74 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms