Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CNOT3O75175 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.84■□□□□ 0.29
CNOT3O75175 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.84■□□□□ 0.29
CNOT3O75175 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.84■□□□□ 0.29
CNOT3O75175 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.84■□□□□ 0.29
CNOT3O75175 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNOT3O75175 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 RNA5SP419-201ENST00000515908 135 ntBASIC16.84■□□□□ 0.29
CNOT3O75175 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.84■□□□□ 0.29
CNOT3O75175 AC009533.2-201ENST00000543664 586 ntBASIC16.84■□□□□ 0.29
CNOT3O75175 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.84■□□□□ 0.29
CNOT3O75175 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.84■□□□□ 0.29
CNOT3O75175 AP001269.4-201ENST00000609611 512 ntBASIC16.84■□□□□ 0.29
CNOT3O75175 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 HLA-A-201ENST00000376802 1334 ntBASIC16.84■□□□□ 0.29
CNOT3O75175 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.84■□□□□ 0.29
CNOT3O75175 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CNOT3O75175 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNOT3O75175 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNOT3O75175 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNOT3O75175 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNOT3O75175 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CNOT3O75175 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CNOT3O75175 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CNOT3O75175 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CNOT3O75175 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.83■□□□□ 0.28
CNOT3O75175 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.83■□□□□ 0.28
CNOT3O75175 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
CNOT3O75175 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.83■□□□□ 0.28
CNOT3O75175 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.83■□□□□ 0.28
CNOT3O75175 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CNOT3O75175 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.83■□□□□ 0.28
CNOT3O75175 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.83■□□□□ 0.28
CNOT3O75175 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.83■□□□□ 0.28
CNOT3O75175 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CNOT3O75175 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.83■□□□□ 0.28
CNOT3O75175 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.83■□□□□ 0.28
CNOT3O75175 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT3O75175 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.82■□□□□ 0.28
CNOT3O75175 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CNOT3O75175 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CNOT3O75175 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CNOT3O75175 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNOT3O75175 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNOT3O75175 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT3O75175 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT3O75175 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms