Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
CTNND1O60716 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTNND1O60716 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.11■□□□□ 0.81
CTNND1O60716 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.11■□□□□ 0.81
CTNND1O60716 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTNND1O60716 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.11■□□□□ 0.81
CTNND1O60716 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTNND1O60716 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTNND1O60716 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.11■□□□□ 0.81
CTNND1O60716 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTNND1O60716 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTNND1O60716 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CTNND1O60716 AL355306.1-201ENST00000415580 579 ntBASIC20.11■□□□□ 0.81
CTNND1O60716 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.11■□□□□ 0.81
CTNND1O60716 AL671277.1-201ENST00000429656 993 ntBASIC20.11■□□□□ 0.81
CTNND1O60716 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.11■□□□□ 0.81
CTNND1O60716 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CTNND1O60716 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.11■□□□□ 0.81
CTNND1O60716 AC099522.2-201ENST00000607001 744 ntBASIC20.11■□□□□ 0.81
CTNND1O60716 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.11■□□□□ 0.81
CTNND1O60716 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTNND1O60716 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CTNND1O60716 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.11■□□□□ 0.81
CTNND1O60716 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
CTNND1O60716 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CTNND1O60716 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CTNND1O60716 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CTNND1O60716 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.1■□□□□ 0.81
CTNND1O60716 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTNND1O60716 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTNND1O60716 AC009113.1-201ENST00000570267 2443 ntBASIC20.1■□□□□ 0.81
CTNND1O60716 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CTNND1O60716 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CTNND1O60716 TIMM8BP1-201ENST00000452384 211 ntBASIC20.1■□□□□ 0.81
CTNND1O60716 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.1■□□□□ 0.81
CTNND1O60716 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CTNND1O60716 AC093520.2-201ENST00000561830 333 ntBASIC20.1■□□□□ 0.81
CTNND1O60716 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.1■□□□□ 0.81
CTNND1O60716 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTNND1O60716 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.1■□□□□ 0.81
CTNND1O60716 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.1■□□□□ 0.81
CTNND1O60716 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.1■□□□□ 0.81
CTNND1O60716 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CTNND1O60716 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CTNND1O60716 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTNND1O60716 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTNND1O60716 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CTNND1O60716 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTNND1O60716 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CTNND1O60716 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CTNND1O60716 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTNND1O60716 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.09■□□□□ 0.81
CTNND1O60716 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTNND1O60716 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTNND1O60716 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CTNND1O60716 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.09■□□□□ 0.81
CTNND1O60716 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTNND1O60716 AL627223.1-201ENST00000416693 442 ntBASIC20.09■□□□□ 0.81
CTNND1O60716 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTNND1O60716 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.09■□□□□ 0.81
CTNND1O60716 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.09■□□□□ 0.81
CTNND1O60716 AL096865.1-201ENST00000606796 927 ntBASIC20.09■□□□□ 0.81
CTNND1O60716 AC009093.7-201ENST00000623853 1223 ntBASIC20.09■□□□□ 0.81
CTNND1O60716 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.09■□□□□ 0.81
CTNND1O60716 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.09■□□□□ 0.81
CTNND1O60716 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.09■□□□□ 0.81
CTNND1O60716 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CTNND1O60716 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CTNND1O60716 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CTNND1O60716 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CTNND1O60716 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.08■□□□□ 0.81
CTNND1O60716 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTNND1O60716 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CTNND1O60716 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.08■□□□□ 0.81
CTNND1O60716 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTNND1O60716 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CTNND1O60716 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.08■□□□□ 0.81
CTNND1O60716 ABALON-201ENST00000629058 1903 ntBASIC20.08■□□□□ 0.81
CTNND1O60716 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.08■□□□□ 0.81
CTNND1O60716 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTNND1O60716 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.08■□□□□ 0.81
CTNND1O60716 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CTNND1O60716 LINC00304-203ENST00000565008 1864 ntBASIC20.08■□□□□ 0.81
CTNND1O60716 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.08■□□□□ 0.81
CTNND1O60716 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTNND1O60716 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTNND1O60716 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
CTNND1O60716 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.08■□□□□ 0.81
CTNND1O60716 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.08■□□□□ 0.81
CTNND1O60716 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.08■□□□□ 0.81
CTNND1O60716 MIR4515-201ENST00000584082 81 ntBASIC20.08■□□□□ 0.81
CTNND1O60716 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.08■□□□□ 0.81
CTNND1O60716 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.08■□□□□ 0.8
CTNND1O60716 AC104581.1-202ENST00000635932 2618 ntBASIC20.08■□□□□ 0.8
CTNND1O60716 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CTNND1O60716 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.08■□□□□ 0.8
CTNND1O60716 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.08■□□□□ 0.8
CTNND1O60716 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTNND1O60716 AC005332.8-201ENST00000622750 2735 ntBASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms