Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.83■□□□□ 0.45
TSPAN3O60637 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TSPAN3O60637 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.83■□□□□ 0.45
TSPAN3O60637 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TSPAN3O60637 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.83■□□□□ 0.44
TSPAN3O60637 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.83■□□□□ 0.44
TSPAN3O60637 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.83■□□□□ 0.44
TSPAN3O60637 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.83■□□□□ 0.44
TSPAN3O60637 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TSPAN3O60637 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.83■□□□□ 0.44
TSPAN3O60637 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.83■□□□□ 0.44
TSPAN3O60637 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.83■□□□□ 0.44
TSPAN3O60637 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.83■□□□□ 0.44
TSPAN3O60637 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TSPAN3O60637 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TSPAN3O60637 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.82■□□□□ 0.44
TSPAN3O60637 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.82■□□□□ 0.44
TSPAN3O60637 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
TSPAN3O60637 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.82■□□□□ 0.44
TSPAN3O60637 PMS2P7-201ENST00000506558 1336 ntBASIC17.82■□□□□ 0.44
TSPAN3O60637 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.82■□□□□ 0.44
TSPAN3O60637 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.82■□□□□ 0.44
TSPAN3O60637 AC108073.2-201ENST00000464002 357 ntBASIC17.82■□□□□ 0.44
TSPAN3O60637 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.82■□□□□ 0.44
TSPAN3O60637 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TSPAN3O60637 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.82■□□□□ 0.44
TSPAN3O60637 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.82■□□□□ 0.44
TSPAN3O60637 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TSPAN3O60637 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 NOC2LP2-201ENST00000407594 1944 ntBASIC17.82■□□□□ 0.44
TSPAN3O60637 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TSPAN3O60637 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TSPAN3O60637 AC106820.2-201ENST00000563775 3264 ntBASIC17.82■□□□□ 0.44
TSPAN3O60637 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.81■□□□□ 0.44
TSPAN3O60637 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
TSPAN3O60637 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TSPAN3O60637 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.81■□□□□ 0.44
TSPAN3O60637 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TSPAN3O60637 ACTG1P4-201ENST00000425123 1122 ntBASIC17.81■□□□□ 0.44
TSPAN3O60637 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.81■□□□□ 0.44
TSPAN3O60637 KRT18P3-201ENST00000451602 1288 ntBASIC17.81■□□□□ 0.44
TSPAN3O60637 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TSPAN3O60637 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.81■□□□□ 0.44
TSPAN3O60637 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TSPAN3O60637 MIR4751-201ENST00000578027 74 ntBASIC17.81■□□□□ 0.44
TSPAN3O60637 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.81■□□□□ 0.44
TSPAN3O60637 AC004790.2-201ENST00000623588 572 ntBASIC17.81■□□□□ 0.44
TSPAN3O60637 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TSPAN3O60637 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms