Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH7O60245 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH7O60245 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH7O60245 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDH7O60245 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH7O60245 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH7O60245 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDH7O60245 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 AL135999.2-201ENST00000622438 1686 ntBASIC16.54■□□□□ 0.24
PCDH7O60245 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 ARMC10P1-201ENST00000313754 855 ntBASIC16.54■□□□□ 0.24
PCDH7O60245 RCN1P2-201ENST00000398357 915 ntBASIC16.54■□□□□ 0.24
PCDH7O60245 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH7O60245 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH7O60245 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 AC092119.3-201ENST00000612618 583 ntBASIC16.54■□□□□ 0.24
PCDH7O60245 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 AC114341.1-201ENST00000618070 349 ntBASIC16.54■□□□□ 0.24
PCDH7O60245 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH7O60245 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH7O60245 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH7O60245 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PCDH7O60245 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH7O60245 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH7O60245 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PCDH7O60245 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH7O60245 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDH7O60245 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDH7O60245 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDH7O60245 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH7O60245 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDH7O60245 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 AC012615.1-201ENST00000565797 1299 ntBASIC16.53■□□□□ 0.24
PCDH7O60245 AC092329.2-201ENST00000598402 547 ntBASIC16.53■□□□□ 0.24
PCDH7O60245 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDH7O60245 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDH7O60245 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH7O60245 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH7O60245 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH7O60245 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDH7O60245 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDH7O60245 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH7O60245 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms