Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFS4O43181 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFS4O43181 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFS4O43181 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFS4O43181 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.59■□□□□ 0.25
NDUFS4O43181 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFS4O43181 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFS4O43181 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDUFS4O43181 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NDUFS4O43181 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
NDUFS4O43181 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFS4O43181 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.58■□□□□ 0.25
NDUFS4O43181 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
NDUFS4O43181 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.58■□□□□ 0.25
NDUFS4O43181 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFS4O43181 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFS4O43181 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFS4O43181 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDUFS4O43181 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.58■□□□□ 0.25
NDUFS4O43181 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.58■□□□□ 0.25
NDUFS4O43181 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.58■□□□□ 0.25
NDUFS4O43181 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NDUFS4O43181 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.58■□□□□ 0.25
NDUFS4O43181 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.58■□□□□ 0.24
NDUFS4O43181 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 TPM4P1-201ENST00000436100 807 ntBASIC16.58■□□□□ 0.24
NDUFS4O43181 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.58■□□□□ 0.24
NDUFS4O43181 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.58■□□□□ 0.24
NDUFS4O43181 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.58■□□□□ 0.24
NDUFS4O43181 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.58■□□□□ 0.24
NDUFS4O43181 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.58■□□□□ 0.24
NDUFS4O43181 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.58■□□□□ 0.24
NDUFS4O43181 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.58■□□□□ 0.24
NDUFS4O43181 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.58■□□□□ 0.24
NDUFS4O43181 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.58■□□□□ 0.24
NDUFS4O43181 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NDUFS4O43181 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.58■□□□□ 0.24
NDUFS4O43181 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.58■□□□□ 0.24
NDUFS4O43181 LTB4R2-202ENST00000528054 3092 ntBASIC16.58■□□□□ 0.24
NDUFS4O43181 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDUFS4O43181 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NDUFS4O43181 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 AC079781.3-201ENST00000449110 356 ntBASIC16.57■□□□□ 0.24
NDUFS4O43181 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.57■□□□□ 0.24
NDUFS4O43181 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 AL031008.1-201ENST00000619963 541 ntBASIC16.57■□□□□ 0.24
NDUFS4O43181 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.57■□□□□ 0.24
NDUFS4O43181 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NDUFS4O43181 AC097637.2-201ENST00000624096 1997 ntBASIC16.57■□□□□ 0.24
NDUFS4O43181 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDUFS4O43181 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.56■□□□□ 0.24
NDUFS4O43181 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NDUFS4O43181 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDUFS4O43181 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms