Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC004790.2-201ENST00000623588 572 ntBASIC19.45■□□□□ 0.7
DDX39AO00148 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
DDX39AO00148 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
DDX39AO00148 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX39AO00148 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
DDX39AO00148 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.45■□□□□ 0.7
DDX39AO00148 AL590787.1-201ENST00000568856 1315 ntBASIC19.45■□□□□ 0.7
DDX39AO00148 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.45■□□□□ 0.7
DDX39AO00148 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
DDX39AO00148 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX39AO00148 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX39AO00148 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX39AO00148 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX39AO00148 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDX39AO00148 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
DDX39AO00148 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
DDX39AO00148 GPR89P-201ENST00000407924 1495 ntBASIC19.44■□□□□ 0.7
DDX39AO00148 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX39AO00148 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.44■□□□□ 0.7
DDX39AO00148 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DDX39AO00148 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.44■□□□□ 0.7
DDX39AO00148 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
DDX39AO00148 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
DDX39AO00148 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX39AO00148 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX39AO00148 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDX39AO00148 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX39AO00148 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
DDX39AO00148 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX39AO00148 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX39AO00148 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX39AO00148 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DDX39AO00148 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 KRT18P3-201ENST00000451602 1288 ntBASIC19.43■□□□□ 0.7
DDX39AO00148 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
DDX39AO00148 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 IGHV3-65-201ENST00000523210 341 ntBASIC19.43■□□□□ 0.7
DDX39AO00148 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.43■□□□□ 0.7
DDX39AO00148 AC008667.4-201ENST00000607370 168 ntBASIC19.43■□□□□ 0.7
DDX39AO00148 AL805961.1-202ENST00000641562 540 ntBASIC19.43■□□□□ 0.7
DDX39AO00148 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX39AO00148 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
DDX39AO00148 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX39AO00148 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
DDX39AO00148 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX39AO00148 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX39AO00148 PI4KAP1-204ENST00000612579 1703 ntBASIC19.42■□□□□ 0.7
DDX39AO00148 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX39AO00148 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 AC106820.2-201ENST00000563775 3264 ntBASIC19.42■□□□□ 0.7
DDX39AO00148 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
DDX39AO00148 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX39AO00148 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX39AO00148 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX39AO00148 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DDX39AO00148 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX39AO00148 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.42■□□□□ 0.7
DDX39AO00148 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.42■□□□□ 0.7
DDX39AO00148 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX39AO00148 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms