Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 KRT18P31-201ENST00000506277 1292 ntBASIC15.29■□□□□ 0.04
NPIPB4C9JG80 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 AL589182.2-201ENST00000619332 1049 ntBASIC15.29■□□□□ 0.04
NPIPB4C9JG80 AL355877.3-201ENST00000622820 899 ntBASIC15.29■□□□□ 0.04
NPIPB4C9JG80 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 AL356309.3-201ENST00000624132 1934 ntBASIC15.29■□□□□ 0.04
NPIPB4C9JG80 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 DUX4L17-201ENST00000557360 1267 ntBASIC15.28■□□□□ 0.04
NPIPB4C9JG80 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB4C9JG80 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 AL590787.1-201ENST00000568856 1315 ntBASIC15.27■□□□□ 0.04
NPIPB4C9JG80 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 REXO1L6P-202ENST00000619970 1078 ntBASIC15.27■□□□□ 0.04
NPIPB4C9JG80 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPB4C9JG80 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms