Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COLCA2A8K830 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COLCA2A8K830 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.27□□□□□ -0.29
COLCA2A8K830 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COLCA2A8K830 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
COLCA2A8K830 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 MIR149-201ENST00000384879 89 ntBASIC13.26□□□□□ -0.29
COLCA2A8K830 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 AC026396.1-201ENST00000419388 421 ntBASIC13.26□□□□□ -0.29
COLCA2A8K830 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.26□□□□□ -0.29
COLCA2A8K830 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 RARRES2P4-201ENST00000514074 484 ntBASIC13.26□□□□□ -0.29
COLCA2A8K830 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
COLCA2A8K830 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
COLCA2A8K830 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 AL109659.2-201ENST00000606809 1674 ntBASIC13.26□□□□□ -0.29
COLCA2A8K830 AC132938.6-201ENST00000623828 1655 ntBASIC13.26□□□□□ -0.29
COLCA2A8K830 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.26□□□□□ -0.29
COLCA2A8K830 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
COLCA2A8K830 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COLCA2A8K830 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
COLCA2A8K830 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 AL391256.1-201ENST00000443260 1855 ntBASIC13.25□□□□□ -0.29
COLCA2A8K830 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.25□□□□□ -0.29
COLCA2A8K830 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
COLCA2A8K830 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
COLCA2A8K830 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
COLCA2A8K830 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 TERF1P5-201ENST00000477545 1207 ntBASIC13.25□□□□□ -0.29
COLCA2A8K830 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
COLCA2A8K830 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.25□□□□□ -0.29
COLCA2A8K830 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.25□□□□□ -0.29
COLCA2A8K830 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COLCA2A8K830 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms