Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.97■□□□□ 0.47
SRRM3A6NNA2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 AC106730.1-201ENST00000566722 1090 ntBASIC17.96■□□□□ 0.47
SRRM3A6NNA2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 AC138894.3-201ENST00000603787 634 ntBASIC17.96■□□□□ 0.47
SRRM3A6NNA2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.96■□□□□ 0.47
SRRM3A6NNA2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 LINC02199-201ENST00000506655 2702 ntBASIC17.96■□□□□ 0.47
SRRM3A6NNA2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.96■□□□□ 0.47
SRRM3A6NNA2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SRRM3A6NNA2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SRRM3A6NNA2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SRRM3A6NNA2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.95■□□□□ 0.46
SRRM3A6NNA2 TSPY22P-201ENST00000427496 604 ntBASIC17.95■□□□□ 0.46
SRRM3A6NNA2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 AC007950.2-201ENST00000615045 2347 ntBASIC17.95■□□□□ 0.46
SRRM3A6NNA2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 AC016396.2-201ENST00000562575 1417 ntBASIC17.95■□□□□ 0.46
SRRM3A6NNA2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRRM3A6NNA2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 MIR940-201ENST00000401276 94 ntBASIC17.94■□□□□ 0.46
SRRM3A6NNA2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 AC104819.1-201ENST00000504587 486 ntBASIC17.94■□□□□ 0.46
SRRM3A6NNA2 RNPS1P1-201ENST00000507437 918 ntBASIC17.94■□□□□ 0.46
SRRM3A6NNA2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 AC055717.3-201ENST00000622967 595 ntBASIC17.94■□□□□ 0.46
SRRM3A6NNA2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRRM3A6NNA2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms