Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 BNIP3P42-201ENST00000454982 569 ntBASIC21.56■■□□□ 1.04
RGPD3A6NKT7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 BNIP3P29-201ENST00000598302 571 ntBASIC21.56■■□□□ 1.04
RGPD3A6NKT7 AC011447.5-201ENST00000616168 564 ntBASIC21.56■■□□□ 1.04
RGPD3A6NKT7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RGPD3A6NKT7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 MTND6P24-201ENST00000440466 518 ntBASIC21.55■■□□□ 1.04
RGPD3A6NKT7 AL355994.2-201ENST00000447882 704 ntBASIC21.55■■□□□ 1.04
RGPD3A6NKT7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 AL139327.4-201ENST00000612362 153 ntBASIC21.55■■□□□ 1.04
RGPD3A6NKT7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
RGPD3A6NKT7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 GNAQP1-201ENST00000444815 1067 ntBASIC21.54■■□□□ 1.04
RGPD3A6NKT7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 AL079307.3-201ENST00000556114 283 ntBASIC21.54■■□□□ 1.04
RGPD3A6NKT7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 RN7SL828P-201ENST00000607615 303 ntBASIC21.54■■□□□ 1.04
RGPD3A6NKT7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.54■■□□□ 1.04
RGPD3A6NKT7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.53■■□□□ 1.04
RGPD3A6NKT7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 AL589739.1-201ENST00000607720 493 ntBASIC21.53■■□□□ 1.04
RGPD3A6NKT7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms