Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 KLF4P1-201ENST00000412782 1185 ntBASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 AL049757.1-201ENST00000616842 1596 ntBASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRABD2BA6NFA1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 DDX43P3-201ENST00000441064 443 ntBASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AC067863.1-201ENST00000494933 530 ntBASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AC068137.2-201ENST00000605408 478 ntBASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AC012645.4-201ENST00000610691 1061 ntBASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRABD2BA6NFA1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 AP002414.1-201ENST00000391405 1147 ntBASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRABD2BA6NFA1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms