Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AP006288.1-201ENST00000446065 395 ntBASIC25.36■■□□□ 1.65
HFM1A2PYH4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 BSG-214ENST00000614867 960 ntTSL 3 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC25.36■■□□□ 1.65
HFM1A2PYH4 AC091812.2-201ENST00000619081 385 ntBASIC25.36■■□□□ 1.65
HFM1A2PYH4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HFM1A2PYH4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC25.35■■□□□ 1.65
HFM1A2PYH4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HFM1A2PYH4 AL353732.1-201ENST00000569618 1459 ntBASIC25.34■■□□□ 1.65
HFM1A2PYH4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HFM1A2PYH4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HFM1A2PYH4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HFM1A2PYH4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 RNF165-205ENST00000588679 2904 ntBASIC25.34■■□□□ 1.65
HFM1A2PYH4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HFM1A2PYH4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 AC099522.2-201ENST00000607001 744 ntBASIC25.34■■□□□ 1.65
HFM1A2PYH4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 AL645728.2-201ENST00000641974 660 ntBASIC25.34■■□□□ 1.65
HFM1A2PYH4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC25.34■■□□□ 1.65
HFM1A2PYH4 KRT8P49-201ENST00000604166 1432 ntBASIC25.34■■□□□ 1.65
HFM1A2PYH4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HFM1A2PYH4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HFM1A2PYH4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HFM1A2PYH4 PCDHB18P-201ENST00000524813 2368 ntBASIC25.33■■□□□ 1.65
HFM1A2PYH4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 AC112482.1-201ENST00000492080 688 ntBASIC25.33■■□□□ 1.65
HFM1A2PYH4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 AP002472.1-201ENST00000577490 586 ntBASIC25.33■■□□□ 1.65
HFM1A2PYH4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HFM1A2PYH4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HFM1A2PYH4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HFM1A2PYH4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC25.33■■□□□ 1.65
HFM1A2PYH4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
HFM1A2PYH4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
HFM1A2PYH4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 AC140658.5-201ENST00000438532 169 ntBASIC25.32■■□□□ 1.64
HFM1A2PYH4 AC074386.1-202ENST00000463561 864 ntBASIC25.32■■□□□ 1.64
HFM1A2PYH4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 AC092902.6-201ENST00000641783 218 ntBASIC25.32■■□□□ 1.64
HFM1A2PYH4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
HFM1A2PYH4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HFM1A2PYH4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
HFM1A2PYH4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 HMGN1P19-201ENST00000436976 333 ntBASIC25.31■■□□□ 1.64
HFM1A2PYH4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC25.31■■□□□ 1.64
HFM1A2PYH4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC25.31■■□□□ 1.64
HFM1A2PYH4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC25.31■■□□□ 1.64
HFM1A2PYH4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC25.31■■□□□ 1.64
HFM1A2PYH4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HFM1A2PYH4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms