Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 RCN1P2-201ENST00000398357 915 ntBASIC17.56■□□□□ 0.4
CCDC78A2IDD5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 AC104819.1-201ENST00000504587 486 ntBASIC17.56■□□□□ 0.4
CCDC78A2IDD5 AC009533.2-201ENST00000543664 586 ntBASIC17.56■□□□□ 0.4
CCDC78A2IDD5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 AC092329.2-201ENST00000598402 547 ntBASIC17.56■□□□□ 0.4
CCDC78A2IDD5 AC099336.1-202ENST00000602961 463 ntBASIC17.56■□□□□ 0.4
CCDC78A2IDD5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC78A2IDD5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 NUS1P2-201ENST00000417358 873 ntBASIC17.55■□□□□ 0.4
CCDC78A2IDD5 IGHV3-47-201ENST00000425060 335 ntBASIC17.55■□□□□ 0.4
CCDC78A2IDD5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 AC122714.2-201ENST00000502787 707 ntBASIC17.55■□□□□ 0.4
CCDC78A2IDD5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 AC138894.3-201ENST00000603787 634 ntBASIC17.55■□□□□ 0.4
CCDC78A2IDD5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.55■□□□□ 0.4
CCDC78A2IDD5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 AC046185.3-201ENST00000623228 1824 ntBASIC17.55■□□□□ 0.4
CCDC78A2IDD5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC78A2IDD5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 AC011467.2-201ENST00000598425 242 ntBASIC17.54■□□□□ 0.4
CCDC78A2IDD5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC78A2IDD5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC78A2IDD5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC78A2IDD5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC78A2IDD5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC78A2IDD5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms