Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC011498.5-201ENST00000592027 486 ntBASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV5-3A0A0A0MS03 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 KLF4P1-201ENST00000412782 1185 ntBASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 KRT8P26-201ENST00000534154 1276 ntBASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 AP005901.3-202ENST00000581653 237 ntBASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 IGHV3-41-201ENST00000613121 348 ntBASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRBV5-3A0A0A0MS03 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV5-3A0A0A0MS03 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms