Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AC107890.1-201ENST00000422478 521 ntBASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AC005034.1-201ENST00000426657 489 ntBASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AC002472.2-201ENST00000442739 958 ntBASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AC125807.1-201ENST00000483097 614 ntBASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AC087641.1-201ENST00000557561 1021 ntBASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AL161645.1-201ENST00000622716 1255 ntBASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 AL035252.4-201ENST00000624174 288 ntBASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HCFC2Q9Y5Z7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 HMGA1P7-201ENST00000406908 502 ntBASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 TSPY16P-201ENST00000449843 468 ntBASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 RN7SL204P-201ENST00000582831 262 ntBASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC2Q9Y5Z7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 MIR661-201ENST00000384842 89 ntBASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 UGT1A2P-201ENST00000454886 866 ntBASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.96■□□□□ 0.47
HCFC2Q9Y5Z7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.96■□□□□ 0.46
HCFC2Q9Y5Z7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.96■□□□□ 0.46
HCFC2Q9Y5Z7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HCFC2Q9Y5Z7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms