Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TSSC4Q9Y5U2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 MYCLP1-201ENST00000372451 1075 ntBASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 KRT18P27-201ENST00000427733 1299 ntBASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 STK19B-204ENST00000512515 211 ntBASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 AC139530.3-201ENST00000620344 690 ntBASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 AL138781.2-201ENST00000617896 1843 ntBASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.59□□□□□ -0.23
TSSC4Q9Y5U2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TSSC4Q9Y5U2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TSSC4Q9Y5U2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.58□□□□□ -0.23
TSSC4Q9Y5U2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.58□□□□□ -0.23
TSSC4Q9Y5U2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.23
TSSC4Q9Y5U2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 AC009949.1-201ENST00000623048 1830 ntBASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 AC132938.5-201ENST00000624980 1813 ntBASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TSSC4Q9Y5U2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms