Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18■□□□□ 0.47
YIPF1Q9Y548 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18■□□□□ 0.47
YIPF1Q9Y548 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18■□□□□ 0.47
YIPF1Q9Y548 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18■□□□□ 0.47
YIPF1Q9Y548 AP002472.1-201ENST00000577490 586 ntBASIC18■□□□□ 0.47
YIPF1Q9Y548 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18■□□□□ 0.47
YIPF1Q9Y548 AL355385.1-201ENST00000606123 409 ntBASIC18■□□□□ 0.47
YIPF1Q9Y548 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18■□□□□ 0.47
YIPF1Q9Y548 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18■□□□□ 0.47
YIPF1Q9Y548 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
YIPF1Q9Y548 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18■□□□□ 0.47
YIPF1Q9Y548 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
YIPF1Q9Y548 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 AL390961.4-201ENST00000623958 2535 ntBASIC17.99■□□□□ 0.47
YIPF1Q9Y548 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 AC027612.4-201ENST00000605371 583 ntBASIC17.99■□□□□ 0.47
YIPF1Q9Y548 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
YIPF1Q9Y548 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YIPF1Q9Y548 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 HMGN1P19-201ENST00000436976 333 ntBASIC17.97■□□□□ 0.47
YIPF1Q9Y548 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 AP000344.2-201ENST00000512987 629 ntBASIC17.97■□□□□ 0.47
YIPF1Q9Y548 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.97■□□□□ 0.47
YIPF1Q9Y548 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms