Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 AC113404.2-201ENST00000507884 177 ntBASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 AP005242.2-201ENST00000580065 1175 ntBASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 LINC02012-201ENST00000608206 1725 ntBASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
KCNIP3Q9Y2W7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP3Q9Y2W7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.52□□□□□ -0.08
KCNIP3Q9Y2W7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 AC005104.2-201ENST00000427818 678 ntBASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 KRT18P6-201ENST00000555540 1265 ntBASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 AP001412.1-201ENST00000608405 714 ntBASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
KCNIP3Q9Y2W7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms