Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGB4Q9UN71 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 AC092850.2-201ENST00000623821 2697 ntBASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGB4Q9UN71 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 TSPY12P-201ENST00000421279 868 ntBASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 AL137013.1-201ENST00000432946 1228 ntBASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 AC009154.2-201ENST00000621177 724 ntBASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGB4Q9UN71 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms