Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND2AQ9ULE3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 RHOQP3-201ENST00000437982 621 ntBASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 AL513190.1-201ENST00000621254 727 ntBASIC20.91■□□□□ 0.94
DENND2AQ9ULE3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 AL691403.2-201ENST00000618460 490 ntBASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DENND2AQ9ULE3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DENND2AQ9ULE3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
DENND2AQ9ULE3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.89■□□□□ 0.94
DENND2AQ9ULE3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
DENND2AQ9ULE3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DENND2AQ9ULE3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
DENND2AQ9ULE3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.89■□□□□ 0.94
DENND2AQ9ULE3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 AC004877.2-201ENST00000623941 599 ntBASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DENND2AQ9ULE3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DENND2AQ9ULE3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 BCAR1-209ENST00000546196 1340 ntBASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DENND2AQ9ULE3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms