Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 AC011498.5-201ENST00000592027 486 ntBASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIN7CQ9NUP9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 TSPY12P-201ENST00000421279 868 ntBASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 AC005332.3-201ENST00000589904 676 ntBASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 AL358472.4-201ENST00000633140 710 ntBASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 AC116353.5-201ENST00000638148 1699 ntBASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.42□□□□□ -0.1
LIN7CQ9NUP9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 Z83836.1-201ENST00000624605 1642 ntBASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIN7CQ9NUP9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms