Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AL139384.1-201ENST00000612143 3047 ntBASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 EGLN1P1-201ENST00000531623 762 ntBASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC034229.4-201ENST00000607861 441 ntBASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC110792.4-201ENST00000609843 298 ntBASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC116407.2-201ENST00000613639 860 ntBASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC092865.7-201ENST00000641832 219 ntBASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 AC083899.2-201ENST00000423285 1376 ntBASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXD4L1Q9NU39 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 PVRIG2P-201ENST00000435460 978 ntBASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 AL353718.1-201ENST00000451028 517 ntBASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 FAM87A-204ENST00000613235 858 ntBASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FOXD4L1Q9NU39 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 MTND2P3-201ENST00000452458 470 ntBASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 FER1L4-210ENST00000615531 5998 ntBASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXD4L1Q9NU39 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
FOXD4L1Q9NU39 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms