Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 SPDYE9P-201ENST00000570642 692 ntBASIC18.29■□□□□ 0.52
TLR9Q9NR96 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 SPDYE10P-202ENST00000612005 668 ntBASIC18.29■□□□□ 0.52
TLR9Q9NR96 SPDYE8P-202ENST00000612377 668 ntBASIC18.29■□□□□ 0.52
TLR9Q9NR96 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR9Q9NR96 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TLR9Q9NR96 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 AC005237.2-201ENST00000434368 219 ntBASIC18.28■□□□□ 0.52
TLR9Q9NR96 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 RNA5SP421-201ENST00000516864 134 ntBASIC18.28■□□□□ 0.52
TLR9Q9NR96 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 AC099522.2-201ENST00000607001 744 ntBASIC18.28■□□□□ 0.52
TLR9Q9NR96 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 Z92544.3-201ENST00000624747 417 ntBASIC18.28■□□□□ 0.52
TLR9Q9NR96 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR9Q9NR96 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TLR9Q9NR96 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 AC140658.5-201ENST00000438532 169 ntBASIC18.27■□□□□ 0.52
TLR9Q9NR96 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 KRT8P48-201ENST00000515599 1220 ntBASIC18.27■□□□□ 0.52
TLR9Q9NR96 AC069262.1-201ENST00000539058 672 ntBASIC18.27■□□□□ 0.52
TLR9Q9NR96 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 AJ011932.1-201ENST00000621707 465 ntBASIC18.27■□□□□ 0.52
TLR9Q9NR96 AL645728.2-201ENST00000641974 660 ntBASIC18.27■□□□□ 0.52
TLR9Q9NR96 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR9Q9NR96 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TLR9Q9NR96 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TLR9Q9NR96 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
TLR9Q9NR96 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TLR9Q9NR96 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TLR9Q9NR96 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.27■□□□□ 0.51
TLR9Q9NR96 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.27■□□□□ 0.51
TLR9Q9NR96 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TLR9Q9NR96 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TLR9Q9NR96 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.27■□□□□ 0.51
TLR9Q9NR96 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TLR9Q9NR96 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TLR9Q9NR96 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TLR9Q9NR96 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms