Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 TSSC2-201ENST00000450217 709 ntBASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 AC016734.2-201ENST00000624325 1377 ntBASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 KRT8P10-201ENST00000450021 1447 ntBASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AC003669.1-201ENST00000334569 611 ntBASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 DRAXINP1-201ENST00000437611 948 ntBASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 KRT18P1-202ENST00000452408 1331 ntBASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEUROD4Q9HD90 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 AC009336.1-201ENST00000608941 1553 ntBASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 SLC25A1P3-201ENST00000395415 828 ntBASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.36■□□□□ 0.21
NEUROD4Q9HD90 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms