Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 MIR574-201ENST00000385209 96 ntBASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 AC005593.1-201ENST00000624894 515 ntBASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.07■□□□□ 0.8
VAT1LQ9HCJ6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 AC005332.8-201ENST00000622750 2735 ntBASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 AC106820.2-201ENST00000563775 3264 ntBASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 AL671883.3-201ENST00000603274 991 ntBASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 AL353135.1-201ENST00000606729 504 ntBASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 ZNF259P1-201ENST00000407656 1365 ntBASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VAT1LQ9HCJ6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 PTCHD3P3-201ENST00000403073 906 ntBASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VAT1LQ9HCJ6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VAT1LQ9HCJ6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VAT1LQ9HCJ6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.04■□□□□ 0.8
VAT1LQ9HCJ6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms