Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 PDPK2P-202ENST00000562415 1191 ntBASIC18.63■□□□□ 0.57
NXF3Q9H4D5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NXF3Q9H4D5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AC067852.2-201ENST00000590513 2313 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AC004967.1-201ENST00000453589 447 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 CXCL1P1-201ENST00000502804 216 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AL078644.1-201ENST00000609881 752 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AC134684.3-201ENST00000641758 218 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AC025580.3-201ENST00000617932 1424 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 GNAS-203ENST00000306120 1878 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 AL133373.2-201ENST00000623187 2828 ntBASIC18.62■□□□□ 0.57
NXF3Q9H4D5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NXF3Q9H4D5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 RPS8P6-201ENST00000426177 609 ntBASIC18.61■□□□□ 0.57
NXF3Q9H4D5 AC092183.1-201ENST00000469884 875 ntBASIC18.61■□□□□ 0.57
NXF3Q9H4D5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 ACTL9-202ENST00000612068 1252 ntBASIC18.61■□□□□ 0.57
NXF3Q9H4D5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 AC068880.1-201ENST00000507289 2297 ntBASIC18.61■□□□□ 0.57
NXF3Q9H4D5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NXF3Q9H4D5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.6■□□□□ 0.57
NXF3Q9H4D5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 NOC2LP2-201ENST00000407594 1944 ntBASIC18.6■□□□□ 0.57
NXF3Q9H4D5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NXF3Q9H4D5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms