Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HIPK3Q9H422 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIPK3Q9H422 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HIPK3Q9H422 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIPK3Q9H422 AKAP8P1-201ENST00000434743 1349 ntBASIC18.83■□□□□ 0.61
HIPK3Q9H422 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
HIPK3Q9H422 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIPK3Q9H422 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HIPK3Q9H422 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK3Q9H422 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.83■□□□□ 0.6
HIPK3Q9H422 GPS2P2-201ENST00000430745 888 ntBASIC18.83■□□□□ 0.6
HIPK3Q9H422 RBPMS2P1-201ENST00000437762 623 ntBASIC18.83■□□□□ 0.6
HIPK3Q9H422 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HIPK3Q9H422 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.83■□□□□ 0.6
HIPK3Q9H422 AC005225.4-201ENST00000557330 545 ntBASIC18.83■□□□□ 0.6
HIPK3Q9H422 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.83■□□□□ 0.6
HIPK3Q9H422 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK3Q9H422 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK3Q9H422 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK3Q9H422 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK3Q9H422 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK3Q9H422 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.83■□□□□ 0.6
HIPK3Q9H422 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK3Q9H422 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.83■□□□□ 0.6
HIPK3Q9H422 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 MIR661-201ENST00000384842 89 ntBASIC18.82■□□□□ 0.6
HIPK3Q9H422 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 AC107918.2-201ENST00000530817 355 ntBASIC18.82■□□□□ 0.6
HIPK3Q9H422 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 DUX4L17-201ENST00000557360 1267 ntBASIC18.82■□□□□ 0.6
HIPK3Q9H422 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.82■□□□□ 0.6
HIPK3Q9H422 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK3Q9H422 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 UGT1A2P-201ENST00000454886 866 ntBASIC18.81■□□□□ 0.6
HIPK3Q9H422 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIPK3Q9H422 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.81■□□□□ 0.6
HIPK3Q9H422 FO538757.1-201ENST00000623083 1397 ntBASIC18.81■□□□□ 0.6
HIPK3Q9H422 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms