Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AKR7A2P1-201ENST00000460134 915 ntBASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 RN7SL618P-201ENST00000477850 296 ntBASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 AC244452.3-201ENST00000636814 210 ntBASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.29■□□□□ 0.36
COL25A1Q9BXS0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 AC012569.1-201ENST00000591191 1524 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 AL080243.2-201ENST00000418783 582 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 RPL7P3-201ENST00000441388 714 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 YBX1P6-201ENST00000442962 1002 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 RN7SL560P-201ENST00000577943 264 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 MIR8072-201ENST00000614241 80 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 AP003419.4-201ENST00000616071 517 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.28■□□□□ 0.36
COL25A1Q9BXS0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AC008267.1-201ENST00000474858 1069 ntBASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
COL25A1Q9BXS0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COL25A1Q9BXS0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
COL25A1Q9BXS0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
COL25A1Q9BXS0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL25A1Q9BXS0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COL25A1Q9BXS0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 KRT18P66-201ENST00000452970 1269 ntBASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 AC020765.3-201ENST00000613051 740 ntBASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.26■□□□□ 0.35
COL25A1Q9BXS0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms