Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 AC046185.3-201ENST00000623228 1824 ntBASIC16.46■□□□□ 0.23
BBS4Q96RK4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BBS4Q96RK4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BBS4Q96RK4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BBS4Q96RK4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
BBS4Q96RK4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
BBS4Q96RK4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BBS4Q96RK4 AP001094.4-201ENST00000579008 2176 ntBASIC16.45■□□□□ 0.22
BBS4Q96RK4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.45■□□□□ 0.22
BBS4Q96RK4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 IGHV3-47-201ENST00000425060 335 ntBASIC16.45■□□□□ 0.22
BBS4Q96RK4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 AC012615.1-201ENST00000565797 1299 ntBASIC16.45■□□□□ 0.22
BBS4Q96RK4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 NPAP1P7-201ENST00000613027 823 ntBASIC16.45■□□□□ 0.22
BBS4Q96RK4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.45■□□□□ 0.22
BBS4Q96RK4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BBS4Q96RK4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 ATP5G2P1-201ENST00000433580 426 ntBASIC16.44■□□□□ 0.22
BBS4Q96RK4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 STK19B-204ENST00000512515 211 ntBASIC16.44■□□□□ 0.22
BBS4Q96RK4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 STK25P1-201ENST00000585406 838 ntBASIC16.44■□□□□ 0.22
BBS4Q96RK4 BNIP3P18-201ENST00000593976 575 ntBASIC16.44■□□□□ 0.22
BBS4Q96RK4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BBS4Q96RK4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
BBS4Q96RK4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms