Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 ACTG1P4-201ENST00000425123 1122 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 BX005266.1-201ENST00000473402 457 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 MTDHP3-201ENST00000594186 672 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 AL121761.2-201ENST00000598007 1648 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 REXO1L6P-202ENST00000619970 1078 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 AL355877.3-201ENST00000622820 899 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 AD000864.1-201ENST00000624076 2295 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 AC097637.2-201ENST00000624096 1997 ntBASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSPG4P5Q96PW8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 AKR1C7P-201ENST00000305623 895 ntBASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 NKAPP1-205ENST00000585790 367 ntBASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSPG4P5Q96PW8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.83■□□□□ 0.45
CSPG4P5Q96PW8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 AL356309.3-201ENST00000624132 1934 ntBASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 PRYP5-201ENST00000451909 266 ntBASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 FGFR3P6-201ENST00000457012 610 ntBASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 AL139288.1-201ENST00000623748 933 ntBASIC17.83■□□□□ 0.44
CSPG4P5Q96PW8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms