Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
USP47Q96K76 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
USP47Q96K76 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.14■■□□□ 1.45
USP47Q96K76 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
USP47Q96K76 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC24.14■■□□□ 1.45
USP47Q96K76 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC24.14■■□□□ 1.45
USP47Q96K76 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
USP47Q96K76 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP47Q96K76 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP47Q96K76 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
USP47Q96K76 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP47Q96K76 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC24.13■■□□□ 1.45
USP47Q96K76 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC24.13■■□□□ 1.45
USP47Q96K76 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC24.13■■□□□ 1.45
USP47Q96K76 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP47Q96K76 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.13■■□□□ 1.45
USP47Q96K76 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.13■■□□□ 1.45
USP47Q96K76 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
USP47Q96K76 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC24.13■■□□□ 1.45
USP47Q96K76 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
USP47Q96K76 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC24.13■■□□□ 1.45
USP47Q96K76 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC24.13■■□□□ 1.45
USP47Q96K76 STX3-203ENST00000529177 1571 ntTSL 2 BASIC24.13■■□□□ 1.45
USP47Q96K76 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
USP47Q96K76 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP47Q96K76 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
USP47Q96K76 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP47Q96K76 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
USP47Q96K76 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
USP47Q96K76 KRT18P13-201ENST00000400056 1290 ntBASIC24.12■■□□□ 1.45
USP47Q96K76 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
USP47Q96K76 AC106730.1-201ENST00000566722 1090 ntBASIC24.12■■□□□ 1.45
USP47Q96K76 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
USP47Q96K76 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC24.12■■□□□ 1.45
USP47Q96K76 PI4KAP1-204ENST00000612579 1703 ntBASIC24.12■■□□□ 1.45
USP47Q96K76 AF228730.7-201ENST00000641842 219 ntBASIC24.12■■□□□ 1.45
USP47Q96K76 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
USP47Q96K76 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC24.11■■□□□ 1.45
USP47Q96K76 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC24.11■■□□□ 1.45
USP47Q96K76 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
USP47Q96K76 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC24.11■■□□□ 1.45
USP47Q96K76 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
USP47Q96K76 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC24.11■■□□□ 1.45
USP47Q96K76 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
USP47Q96K76 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
USP47Q96K76 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.11■■□□□ 1.45
USP47Q96K76 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
USP47Q96K76 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.11■■□□□ 1.45
USP47Q96K76 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC24.11■■□□□ 1.45
USP47Q96K76 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC24.11■■□□□ 1.45
USP47Q96K76 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
USP47Q96K76 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC24.11■■□□□ 1.45
USP47Q96K76 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
USP47Q96K76 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC24.11■■□□□ 1.45
USP47Q96K76 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
USP47Q96K76 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
USP47Q96K76 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC24.11■■□□□ 1.45
USP47Q96K76 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC24.11■■□□□ 1.45
USP47Q96K76 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC24.1■■□□□ 1.45
USP47Q96K76 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.1■■□□□ 1.45
USP47Q96K76 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
USP47Q96K76 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP47Q96K76 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
USP47Q96K76 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.1■■□□□ 1.45
USP47Q96K76 AC002310.6-201ENST00000624451 1377 ntBASIC24.1■■□□□ 1.45
USP47Q96K76 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
USP47Q96K76 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP47Q96K76 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC24.1■■□□□ 1.45
USP47Q96K76 MIR574-201ENST00000385209 96 ntBASIC24.1■■□□□ 1.45
USP47Q96K76 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
USP47Q96K76 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
USP47Q96K76 IGLL3P-201ENST00000412472 434 ntBASIC24.1■■□□□ 1.45
USP47Q96K76 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
USP47Q96K76 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC24.1■■□□□ 1.45
USP47Q96K76 AC107918.2-201ENST00000530817 355 ntBASIC24.1■■□□□ 1.45
USP47Q96K76 AC004790.2-201ENST00000623588 572 ntBASIC24.1■■□□□ 1.45
USP47Q96K76 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP47Q96K76 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
USP47Q96K76 AP001094.4-201ENST00000579008 2176 ntBASIC24.1■■□□□ 1.45
USP47Q96K76 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC24.1■■□□□ 1.45
USP47Q96K76 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
USP47Q96K76 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC24.1■■□□□ 1.45
USP47Q96K76 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
USP47Q96K76 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC24.09■■□□□ 1.45
USP47Q96K76 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC24.09■■□□□ 1.45
USP47Q96K76 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC24.09■■□□□ 1.45
USP47Q96K76 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 AC124947.2-201ENST00000547118 1133 ntBASIC24.09■■□□□ 1.45
USP47Q96K76 MIR4751-201ENST00000578027 74 ntBASIC24.09■■□□□ 1.45
USP47Q96K76 AC010654.1-201ENST00000615722 808 ntBASIC24.09■■□□□ 1.45
USP47Q96K76 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
USP47Q96K76 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 AC060834.1-201ENST00000443027 2032 ntBASIC24.09■■□□□ 1.45
USP47Q96K76 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
USP47Q96K76 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms