Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 AC022210.1-201ENST00000449856 793 ntBASIC18.66■□□□□ 0.58
LRCH3Q96II8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 AC084121.4-201ENST00000641598 221 ntBASIC18.66■□□□□ 0.58
LRCH3Q96II8 AF228730.8-201ENST00000642140 221 ntBASIC18.66■□□□□ 0.58
LRCH3Q96II8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 MYLKP1-201ENST00000509077 1580 ntBASIC18.66■□□□□ 0.58
LRCH3Q96II8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRCH3Q96II8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRCH3Q96II8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 BCYRN1-201ENST00000418539 200 ntBASIC18.65■□□□□ 0.58
LRCH3Q96II8 TSSK5P-201ENST00000423978 907 ntBASIC18.65■□□□□ 0.58
LRCH3Q96II8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 KRT17P8-201ENST00000540749 863 ntBASIC18.65■□□□□ 0.58
LRCH3Q96II8 AC132938.2-201ENST00000579188 680 ntBASIC18.65■□□□□ 0.58
LRCH3Q96II8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 GPR182-203ENST00000622922 591 ntBASIC18.65■□□□□ 0.58
LRCH3Q96II8 AL591163.1-201ENST00000641757 987 ntBASIC18.65■□□□□ 0.58
LRCH3Q96II8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LRCH3Q96II8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 AC100757.3-201ENST00000622361 1406 ntBASIC18.65■□□□□ 0.58
LRCH3Q96II8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCH3Q96II8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LRCH3Q96II8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRCH3Q96II8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LRCH3Q96II8 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.64■□□□□ 0.58
LRCH3Q96II8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRCH3Q96II8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
LRCH3Q96II8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.64■□□□□ 0.58
LRCH3Q96II8 AC022144.1-201ENST00000602255 1580 ntBASIC18.64■□□□□ 0.58
LRCH3Q96II8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.64■□□□□ 0.57
LRCH3Q96II8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.64■□□□□ 0.57
LRCH3Q96II8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 AL590560.3-201ENST00000623350 461 ntBASIC18.64■□□□□ 0.57
LRCH3Q96II8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRCH3Q96II8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.64■□□□□ 0.57
LRCH3Q96II8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH3Q96II8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 COX5BP2-201ENST00000392354 334 ntBASIC18.63■□□□□ 0.57
LRCH3Q96II8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 AC140658.5-201ENST00000438532 169 ntBASIC18.63■□□□□ 0.57
LRCH3Q96II8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 IGHV3-62-201ENST00000520057 340 ntBASIC18.63■□□□□ 0.57
LRCH3Q96II8 AC027369.6-201ENST00000525520 931 ntBASIC18.63■□□□□ 0.57
LRCH3Q96II8 RAB43P1-201ENST00000561790 589 ntBASIC18.63■□□□□ 0.57
LRCH3Q96II8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 MIR4538-201ENST00000581377 78 ntBASIC18.63■□□□□ 0.57
LRCH3Q96II8 MIR4259-201ENST00000584466 101 ntBASIC18.63■□□□□ 0.57
LRCH3Q96II8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms