Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX11Q96FC9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DDX11Q96FC9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 AC022211.2-201ENST00000585075 2527 ntBASIC20.58■□□□□ 0.89
DDX11Q96FC9 AP001094.4-201ENST00000579008 2176 ntBASIC20.58■□□□□ 0.89
DDX11Q96FC9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 AC018712.1-201ENST00000455767 687 ntBASIC20.58■□□□□ 0.89
DDX11Q96FC9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 SLC25A1P1-201ENST00000528351 927 ntBASIC20.58■□□□□ 0.89
DDX11Q96FC9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX11Q96FC9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX11Q96FC9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
DDX11Q96FC9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.58■□□□□ 0.88
DDX11Q96FC9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
DDX11Q96FC9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
DDX11Q96FC9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.58■□□□□ 0.88
DDX11Q96FC9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX11Q96FC9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 AC096633.1-201ENST00000422446 749 ntBASIC20.57■□□□□ 0.88
DDX11Q96FC9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 AC117500.6-201ENST00000624871 588 ntBASIC20.57■□□□□ 0.88
DDX11Q96FC9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 LYSMD4-203ENST00000378904 2122 ntBASIC20.57■□□□□ 0.88
DDX11Q96FC9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX11Q96FC9 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.57■□□□□ 0.88
DDX11Q96FC9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX11Q96FC9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 AP005117.1-201ENST00000584346 1413 ntBASIC20.56■□□□□ 0.88
DDX11Q96FC9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 RPS2P28-201ENST00000314255 741 ntBASIC20.56■□□□□ 0.88
DDX11Q96FC9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX11Q96FC9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX11Q96FC9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms