Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 Z83836.1-201ENST00000624605 1642 ntBASIC15.59■□□□□ 0.09
PTP4A1Q93096 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 MYCLP1-201ENST00000372451 1075 ntBASIC15.59■□□□□ 0.09
PTP4A1Q93096 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 AC007967.3-201ENST00000434308 558 ntBASIC15.59■□□□□ 0.09
PTP4A1Q93096 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 VENTXP5-201ENST00000523979 775 ntBASIC15.59■□□□□ 0.09
PTP4A1Q93096 AC109462.3-201ENST00000573934 613 ntBASIC15.59■□□□□ 0.09
PTP4A1Q93096 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 AC092068.3-201ENST00000587894 2016 ntBASIC15.59■□□□□ 0.09
PTP4A1Q93096 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.59■□□□□ 0.09
PTP4A1Q93096 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTP4A1Q93096 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PTP4A1Q93096 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTP4A1Q93096 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.58■□□□□ 0.09
PTP4A1Q93096 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTP4A1Q93096 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.58■□□□□ 0.09
PTP4A1Q93096 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 AL031133.1-201ENST00000406807 723 ntBASIC15.58■□□□□ 0.08
PTP4A1Q93096 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 AL136038.3-201ENST00000561909 1096 ntBASIC15.58■□□□□ 0.08
PTP4A1Q93096 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 AC083849.1-201ENST00000615227 514 ntBASIC15.58■□□□□ 0.08
PTP4A1Q93096 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 AL121956.5-201ENST00000625261 221 ntBASIC15.58■□□□□ 0.08
PTP4A1Q93096 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
PTP4A1Q93096 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTP4A1Q93096 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
PTP4A1Q93096 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTP4A1Q93096 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms