Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.81■■□□□ 1.4
PTPRUQ92729 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPRUQ92729 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPRUQ92729 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPRUQ92729 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPRUQ92729 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPRUQ92729 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPRUQ92729 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PTPRUQ92729 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PTPRUQ92729 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPRUQ92729 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC23.81■■□□□ 1.4
PTPRUQ92729 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPRUQ92729 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC23.81■■□□□ 1.4
PTPRUQ92729 AC027369.6-201ENST00000525520 931 ntBASIC23.81■■□□□ 1.4
PTPRUQ92729 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC23.81■■□□□ 1.4
PTPRUQ92729 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC23.81■■□□□ 1.4
PTPRUQ92729 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPRUQ92729 LINC01451-201ENST00000623792 534 ntBASIC23.81■■□□□ 1.4
PTPRUQ92729 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PTPRUQ92729 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPRUQ92729 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPRUQ92729 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC23.81■■□□□ 1.4
PTPRUQ92729 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
PTPRUQ92729 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PTPRUQ92729 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 HCG4-201ENST00000418983 998 ntBASIC23.8■■□□□ 1.4
PTPRUQ92729 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC23.8■■□□□ 1.4
PTPRUQ92729 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 MIR6752-201ENST00000618442 71 ntBASIC23.8■■□□□ 1.4
PTPRUQ92729 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPRUQ92729 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.8■■□□□ 1.4
PTPRUQ92729 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC23.8■■□□□ 1.4
PTPRUQ92729 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPRUQ92729 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPRUQ92729 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPRUQ92729 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PTPRUQ92729 PGF-202ENST00000405431 666 ntTSL 5 BASIC23.79■■□□□ 1.4
PTPRUQ92729 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPRUQ92729 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC23.79■■□□□ 1.4
PTPRUQ92729 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 AC010336.2-201ENST00000564226 506 ntBASIC23.79■■□□□ 1.4
PTPRUQ92729 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC23.79■■□□□ 1.4
PTPRUQ92729 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.79■■□□□ 1.4
PTPRUQ92729 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC23.79■■□□□ 1.4
PTPRUQ92729 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPRUQ92729 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPRUQ92729 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PTPRUQ92729 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PTPRUQ92729 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PTPRUQ92729 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.79■■□□□ 1.4
PTPRUQ92729 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
PTPRUQ92729 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTPRUQ92729 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC23.78■■□□□ 1.4
PTPRUQ92729 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTPRUQ92729 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PTPRUQ92729 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPRUQ92729 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPRUQ92729 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPRUQ92729 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPRUQ92729 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC23.78■■□□□ 1.4
PTPRUQ92729 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPRUQ92729 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
PTPRUQ92729 AC027307.3-201ENST00000594262 1100 ntBASIC23.78■■□□□ 1.4
PTPRUQ92729 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPRUQ92729 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PTPRUQ92729 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPRUQ92729 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPRUQ92729 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PTPRUQ92729 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPRUQ92729 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PTPRUQ92729 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPRUQ92729 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPRUQ92729 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPRUQ92729 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPRUQ92729 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPRUQ92729 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTPRUQ92729 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms