Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 AC009154.2-201ENST00000621177 724 ntBASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 KRT89P-201ENST00000620027 1478 ntBASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
CKAP2Q8WWK9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CKAP2Q8WWK9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 AL157888.1-201ENST00000631930 593 ntBASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.21■□□□□ 0.35
CKAP2Q8WWK9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 AC098590.1-201ENST00000468126 897 ntBASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms