Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC002558.1-201ENST00000488906 803 ntBASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC005332.3-201ENST00000589904 676 ntBASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC005363.2-201ENST00000618631 242 ntBASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC133561.5-201ENST00000635547 218 ntBASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC010460.3-201ENST00000511359 1579 ntBASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 AC105020.1-201ENST00000435356 2205 ntBASIC17.15■□□□□ 0.34
CCNYL1Q8N7R7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCNYL1Q8N7R7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCNYL1Q8N7R7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.14■□□□□ 0.34
CCNYL1Q8N7R7 FLJ38576-201ENST00000623820 2459 ntBASIC17.14■□□□□ 0.34
CCNYL1Q8N7R7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 LINC02012-201ENST00000608206 1725 ntBASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 AC113347.1-201ENST00000413321 391 ntBASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 AC117947.1-201ENST00000427448 529 ntBASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCNYL1Q8N7R7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 AC093525.9-201ENST00000624961 1746 ntBASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 TERF1P1-201ENST00000311003 1181 ntBASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 HBZP1-201ENST00000354915 429 ntBASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 KRT18P38-201ENST00000449496 1282 ntBASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 AC092053.1-201ENST00000605787 1936 ntBASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CCNYL1Q8N7R7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNYL1Q8N7R7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms