Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 AC021087.4-201ENST00000563761 564 ntBASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 AC104692.2-201ENST00000603054 253 ntBASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCDC82Q8N4S0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 SIGLEC16-201ENST00000599858 1437 ntBASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 MTDHP4-201ENST00000600287 670 ntBASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AC064862.7-201ENST00000604520 867 ntBASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AC073592.4-201ENST00000623827 446 ntBASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AC148477.8-201ENST00000624298 468 ntBASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AC097637.2-201ENST00000624096 1997 ntBASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC82Q8N4S0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC82Q8N4S0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC82Q8N4S0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms