Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 AC009949.1-201ENST00000623048 1830 ntBASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 AC020763.4-201ENST00000623414 4170 ntBASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 AC023141.5-201ENST00000458585 616 ntBASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 AC022145.2-201ENST00000598203 171 ntBASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SYNPOQ8N3V7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 AL035633.1-201ENST00000406139 838 ntBASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 BCRP1-201ENST00000444246 691 ntBASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNPOQ8N3V7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AC002056.1-201ENST00000395613 760 ntBASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 PAWRP1-201ENST00000451083 565 ntBASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AC015911.4-201ENST00000588022 1070 ntBASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AC093512.1-201ENST00000617969 520 ntBASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SYNPOQ8N3V7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms